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pycodegen
pystencils
Commits
088e2d72
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088e2d72
authored
Jan 9, 2024
by
Frederik Hennig
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remove accidentally added file
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7e8434f2
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!363
Fix type equality checks
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import distutils
import io
import os
from contextlib import redirect_stdout
from importlib import import_module
import setuptools
import versioneer
try:
import cython # noqa
USE_CYTHON = True
except ImportError:
USE_CYTHON = False
quick_tests = [
'test_quicktests.test_basic_kernel',
'test_quicktests.test_basic_blocking_staggered',
'test_quicktests.test_basic_vectorization',
]
class SimpleTestRunner(distutils.cmd.Command):
"""A custom command to run selected tests"""
description = 'run some quick tests'
user_options = []
@staticmethod
def _run_tests_in_module(test):
"""Short test runner function - to work also if py.test is not installed."""
test = f'pystencils_tests.{test}'
mod, function_name = test.rsplit('.', 1)
if isinstance(mod, str):
mod = import_module(mod)
func = getattr(mod, function_name)
print(f" -> {function_name} in {mod.__name__}")
with redirect_stdout(io.StringIO()):
func()
def initialize_options(self):
pass
def finalize_options(self):
pass
def run(self):
"""Run command."""
for test in quick_tests:
self._run_tests_in_module(test)
def readme():
with open('README.md') as f:
return f.read()
def cython_extensions(*extensions):
from distutils.extension import Extension
if USE_CYTHON:
ext = '.pyx'
result = [Extension(e, [os.path.join(*e.split(".")) + ext]) for e in extensions]
from Cython.Build import cythonize
result = cythonize(result, language_level=3)
return result
elif all([os.path.exists(os.path.join(*e.split(".")) + '.c') for e in extensions]):
ext = '.c'
result = [Extension(e, [os.path.join(*e.split(".")) + ext]) for e in extensions]
return result
else:
return None
def get_cmdclass():
cmdclass = {"quicktest": SimpleTestRunner}
cmdclass.update(versioneer.get_cmdclass())
return cmdclass
setuptools.setup(name='pystencils',
description='Speeding up stencil computations on CPUs and GPUs',
version=versioneer.get_version(),
long_description=readme(),
long_description_content_type="text/markdown",
author='Martin Bauer, Jan Hönig, Markus Holzer',
license='AGPLv3',
author_email='cs10-codegen@fau.de',
url='https://i10git.cs.fau.de/pycodegen/pystencils/',
packages=['pystencils'] + ['pystencils.' + s for s in setuptools.find_packages('pystencils')], # TODO: Why?
install_requires=['sympy>=1.6,<=1.11.1', 'numpy>=1.8.0', 'pymbolic>=2022.2', 'appdirs', 'joblib'],
package_data={'pystencils': ['include/*.h', # todo: MANIFEST?
'backends/cuda_known_functions.txt',
'backends/opencl1.1_known_functions.txt',
'boundaries/createindexlistcython.c',
'boundaries/createindexlistcython.pyx']},
ext_modules=cython_extensions("pystencils.boundaries.createindexlistcython"), # todo: must remain here
classifiers=[
'Development Status :: 4 - Beta',
'Framework :: Jupyter',
'Topic :: Software Development :: Code Generators',
'Topic :: Scientific/Engineering :: Physics',
'Intended Audience :: Developers',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)',
],
project_urls={
"Bug Tracker": "https://i10git.cs.fau.de/pycodegen/pystencils/-/issues",
"Documentation": "https://pycodegen.pages.i10git.cs.fau.de/pystencils/",
"Source Code": "https://i10git.cs.fau.de/pycodegen/pystencils",
},
extras_require={
'gpu': ['cupy'],
'alltrafos': ['islpy', 'py-cpuinfo'],
'bench_db': ['blitzdb', 'pymongo', 'pandas'],
'interactive': ['matplotlib', 'ipy_table', 'imageio', 'jupyter', 'pyevtk', 'rich', 'graphviz'],
'doc': ['sphinx', 'sphinx_rtd_theme', 'nbsphinx',
'sphinxcontrib-bibtex', 'sphinx_autodoc_typehints', 'pandoc'],
'use_cython': ['Cython']
},
tests_require=['pytest',
'pytest-cov',
'pytest-html',
'ansi2html',
'pytest-xdist',
'flake8',
'nbformat',
'nbconvert',
'ipython',
'randomgen>=1.18'],
python_requires=">=3.10",
cmdclass=get_cmdclass() # todo: remove?
)
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