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Anirudh Jonnalagadda
lbmpy
Commits
ef741a19
Commit
ef741a19
authored
2 years ago
by
Philipp Suffa
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Integrated Sparse kernels into newest version of lbmpy
parent
07be81fe
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lbmpy/sparse/update_rule_sparse.py
+58
-19
58 additions, 19 deletions
lbmpy/sparse/update_rule_sparse.py
with
58 additions
and
19 deletions
lbmpy/sparse/update_rule_sparse.py
+
58
−
19
View file @
ef741a19
from
pystencils
import
Assignment
,
AssignmentCollection
from
pystencils
import
Assignment
,
AssignmentCollection
# noinspection PyProtectedMember
# noinspection PyProtectedMember
from
pystencils.field
import
Field
,
FieldType
,
compute_strides
from
pystencils.field
import
Field
,
FieldType
,
compute_strides
from
lbmpy.advanced_streaming
import
Timestep
,
is_inplace
from
pystencils.stencil
import
inverse_direction
from
pystencils.simp
import
add_subexpressions_for_field_reads
AC
=
AssignmentCollection
AC
=
AssignmentCollection
...
@@ -19,37 +23,67 @@ def create_symbolic_list(name, num_cells, values_per_cell, dtype, layout='AoS'):
...
@@ -19,37 +23,67 @@ def create_symbolic_list(name, num_cells, values_per_cell, dtype, layout='AoS'):
return
Field
(
name
,
FieldType
.
CUSTOM
,
dtype
,
spatial_layout
,
shape
,
strides
)
return
Field
(
name
,
FieldType
.
CUSTOM
,
dtype
,
spatial_layout
,
shape
,
strides
)
def
create_lb_update_rule_sparse
(
collision_rule
,
src
,
dst
,
idx
,
kernel_type
=
'
stream_pull_collide
'
)
->
AC
:
def
create_lb_update_rule_sparse
(
collision_rule
,
lbm_config
,
src
,
idx
,
dst
=
None
,
inner_outer_split
=
False
)
->
AC
:
"""
Creates a update rule from a collision rule using compressed pdf storage and two (src/dst) arrays.
"""
Creates a update rule from a collision rule using compressed pdf storage and two (src/dst) arrays.
Args:
Args:
collision_rule: arbitrary collision rule, e.g. created with create_lb_collision_rule
collision_rule: arbitrary collision rule, e.g. created with create_lb_collision_rule
src: symbolic field to read from
src: symbolic field to read from
dst: symbolic field to write to
idx: symbolic index field
idx: symbolic index field
kernel_type: one of
'
stream_pull_collide
'
,
'
collide_only
'
or
'
stream_pull_only
'
dst: symbolic field to write to
inner_outer_split: communication hiding, enables absolut access with pull idx also on dst field
Returns:
Returns:
update rule
update rule
"""
"""
assert
kernel_type
in
(
'
stream_pull_collide
'
,
'
collide_only
'
,
'
stream_pull_only
'
)
assert
lbm_config
.
kernel_type
in
(
'
stream_pull_collide
'
,
'
collide_only
'
,
'
stream_pull_only
'
,
'
default_stream_collide
'
)
method
=
collision_rule
.
method
method
=
collision_rule
.
method
q
=
len
(
method
.
stencil
)
q
=
len
(
method
.
stencil
)
symbol_subs
=
_list_substitutions
(
method
,
src
,
idx
)
if
lbm_config
.
streaming_pattern
==
'
pull
'
:
symbol_subs
=
{
sym
:
src
.
absolute_access
((
idx
(
i
),),
())
for
i
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)}
if
kernel_type
==
'
stream_pull_only
'
:
if
not
inner_outer_split
:
assignments
=
[]
symbol_subs
[
method
.
pre_collision_pdf_symbols
[
0
]]
=
src
(
0
)
for
i
in
range
(
q
):
for
i
,
tmp_pdf
in
enumerate
(
method
.
post_collision_pdf_symbols
):
lhs
=
dst
(
i
)
symbol_subs
[
tmp_pdf
]
=
dst
(
i
)
rhs
=
symbol_subs
[
method
.
pre_collision_pdf_symbols
[
i
]]
else
:
if
lhs
-
rhs
!=
0
:
for
i
,
tmp_pdf
in
enumerate
(
method
.
post_collision_pdf_symbols
):
assignments
.
append
(
Assignment
(
lhs
,
rhs
))
symbol_subs
[
tmp_pdf
]
=
dst
.
absolute_access
((
idx
(
0
),),
(
i
,))
return
AssignmentCollection
(
assignments
,
subexpressions
=
[])
else
:
if
lbm_config
.
kernel_type
==
'
stream_pull_only
'
:
write_target
=
src
if
kernel_type
==
'
collide_only
'
else
dst
assignments
=
[]
symbol_subs
.
update
({
sym
:
write_target
(
i
)
for
i
,
sym
in
enumerate
(
method
.
post_collision_pdf_symbols
)})
for
i
in
range
(
q
):
lhs
=
dst
(
i
)
rhs
=
symbol_subs
[
method
.
pre_collision_pdf_symbols
[
i
]]
if
lhs
-
rhs
!=
0
:
assignments
.
append
(
Assignment
(
lhs
,
rhs
))
return
AssignmentCollection
(
assignments
,
subexpressions
=
[])
elif
lbm_config
.
kernel_type
==
'
collide_only
'
:
symbol_subs
.
update
({
sym
:
src
(
i
)
for
i
,
sym
in
enumerate
(
method
.
post_collision_pdf_symbols
)})
return
collision_rule
.
new_with_substitutions
(
symbol_subs
)
return
collision_rule
.
new_with_substitutions
(
symbol_subs
)
elif
lbm_config
.
streaming_pattern
==
'
aa
'
:
symbol_subs
=
{}
if
lbm_config
.
timestep
==
Timestep
.
EVEN
:
if
inner_outer_split
:
symbol_subs
.
update
({
sym
:
src
.
absolute_access
((
idx
(
0
),),
(
d
,))
for
d
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)})
symbol_subs
.
update
({
method
.
post_collision_pdf_symbols
[
method
.
stencil
.
index
(
d
)]:
src
.
absolute_access
((
idx
(
0
),),
(
method
.
stencil
.
index
(
inverse_direction
(
d
)),))
for
d
in
method
.
stencil
})
else
:
symbol_subs
.
update
({
sym
:
src
(
d
)
for
d
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)})
symbol_subs
.
update
({
method
.
post_collision_pdf_symbols
[
method
.
stencil
.
index
(
d
)]:
src
(
method
.
stencil
.
index
(
inverse_direction
(
d
)))
for
d
in
method
.
stencil
})
else
:
#Timestep.ODD
for
d
in
method
.
stencil
:
symbol_subs
.
update
({
method
.
pre_collision_pdf_symbols
[
method
.
stencil
.
index
(
d
)]
:
src
.
absolute_access
((
idx
(
method
.
stencil
.
index
(
inverse_direction
(
d
))),),
())
for
d
in
method
.
stencil
})
symbol_subs
.
update
({
method
.
post_collision_pdf_symbols
[
method
.
stencil
.
index
(
d
)]
:
src
.
absolute_access
((
idx
(
method
.
stencil
.
index
(
d
)),),
())
for
d
in
method
.
stencil
})
if
not
inner_outer_split
:
symbol_subs
[
method
.
pre_collision_pdf_symbols
[
0
]]
=
src
(
0
)
symbol_subs
[
method
.
post_collision_pdf_symbols
[
0
]]
=
src
(
0
)
result
=
collision_rule
.
new_with_substitutions
(
symbol_subs
)
result
=
add_subexpressions_for_field_reads
(
result
,
subexpressions
=
True
,
main_assignments
=
True
)
return
result
def
create_macroscopic_value_getter_sparse
(
method
,
pdfs
,
output_descriptor
)
->
AC
:
def
create_macroscopic_value_getter_sparse
(
method
,
pdfs
,
output_descriptor
)
->
AC
:
"""
Returns assignment collection with assignments to compute density and/or velocity.
"""
Returns assignment collection with assignments to compute density and/or velocity.
...
@@ -77,13 +111,13 @@ def create_macroscopic_value_setter_sparse(method, pdfs, density, velocity) -> A
...
@@ -77,13 +111,13 @@ def create_macroscopic_value_setter_sparse(method, pdfs, density, velocity) -> A
inp_eqs
=
cqc
.
equilibrium_input_equations_from_init_values
(
density
,
velocity
,
force_substitution
=
False
)
inp_eqs
=
cqc
.
equilibrium_input_equations_from_init_values
(
density
,
velocity
,
force_substitution
=
False
)
result
=
method
.
get_equilibrium
(
conserved_quantity_equations
=
inp_eqs
)
result
=
method
.
get_equilibrium
(
conserved_quantity_equations
=
inp_eqs
)
substitutions
=
{
a
:
b
for
a
,
b
in
zip
(
method
.
post_collision_pdf_symbols
,
pdfs
.
center_vector
)}
substitutions
=
{
a
:
b
for
a
,
b
in
zip
(
method
.
post_collision_pdf_symbols
,
pdfs
.
center_vector
)}
return
result
.
new_with_substitutions
(
substitutions
)
.
new_without_subexpressions
()
return
result
.
new_with_substitutions
(
substitutions
)
# ---------------------------------------- Helper Functions ------------------------------------------------------------
# ---------------------------------------- Helper Functions ------------------------------------------------------------
def
_list_substitutions
(
method
,
src
,
idx
,
store_center
=
False
):
def
_list_substitutions
(
method
,
src
,
idx
,
dst
=
None
,
cell_idx
=
None
,
store_center
=
False
):
if
store_center
:
if
store_center
:
result
=
{
sym
:
src
.
absolute_access
((
idx
(
i
),),
())
result
=
{
sym
:
src
.
absolute_access
((
idx
(
i
),),
())
for
i
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)}
for
i
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)}
...
@@ -92,4 +126,9 @@ def _list_substitutions(method, src, idx, store_center=False):
...
@@ -92,4 +126,9 @@ def _list_substitutions(method, src, idx, store_center=False):
for
i
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)}
for
i
,
sym
in
enumerate
(
method
.
pre_collision_pdf_symbols
)}
result
[
method
.
pre_collision_pdf_symbols
[
0
]]
=
src
(
0
)
result
[
method
.
pre_collision_pdf_symbols
[
0
]]
=
src
(
0
)
if
cell_idx
is
not
None
:
for
i
,
tmp_pdf
in
enumerate
(
method
.
post_collision_pdf_symbols
):
result
[
tmp_pdf
]
=
dst
.
absolute_access
((
cell_idx
(
0
),),
(
i
,
))
return
result
return
result
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